Comprehensive Bioinformatics Analysis
Main Services
Comprehensive RNA sequencing analysis to assess gene expression patterns. Our service includes differential expression analysis, transcript quantification, and functional annotation. Suitable for detecting novel transcripts and analyzing expression profiles across different conditions.
High-throughput expression profiling using array platforms. Analyze gene expression changes on a global scale with validated microarray technologies.
Our comprehensive gene expression analysis includes:
- Differential Expression Analysis: Identify genes with significant expression changes between conditions.
- Transcript Quantification: Accurate measurement of transcript levels.
- Functional Annotation: Assign biological functions and pathway associations to genes of interest.
- SNP and Indel Variant CallingDetection of single nucleotide polymorphisms (SNPs) and small insertions/deletions (indels).
- Copy Number Variation (CNV) AnalysisAnalysis of gene amplifications, deletions, and other copy number changes.
- Structural Variant DetectionIdentification of structural variants like translocations, inversions, and large deletions.
- Somatic and Germline Variant DetectionDetection of somatic and germline variants for cancer and genetic studies.
- Mitochondrial Variant AnalysisAnalysis of mitochondrial genome variants, including heteroplasmy detection.
- Functional Annotation of VariantsAnnotation of variants to assess their impact using external databases.
Other Services
Assistance with the preparation and submission of RNAseq, methylation, or other genomic data to the NIH Gene Expression Omnibus (GEO) repository. This service ensures that your data is properly formatted and compliant with GEO submission standards.
NIH SRA Submission (DNAseq Exome or Whole-Genome Data)
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Frequently Asked Questions (FAQ) – Bioinformatics Services
We offer a wide range of bioinformatics services, including RNA-Seq and gene expression analysis, variant selection, structural variation detection, and custom data visualization. Our services also cover functional analysis of genomic regions using publicly available databases.
RNA-Seq (RNA sequencing) is a technique used to measure gene expression by analyzing RNA in a sample. We provide comprehensive RNA-Seq data analysis, including differential expression, transcriptome assembly, and functional annotation.
Gene expression analysis determines which genes are being actively transcribed into RNA. We perform gene expression profiling to identify changes in gene expression between different conditions or treatments, helping researchers understand biological processes.
Variant selection involves identifying single nucleotide polymorphisms (SNPs) and insertions or deletions (Indels) in genomic sequences. Structural variation detection includes identifying larger genomic changes, such as copy number variations (CNVs) and translocations. These analyses help detect mutations or genetic changes linked to diseases.
We create custom visualizations using bioinformatics tools like Prism and IGV genome browsers. Our visualizations are designed to effectively represent complex genomic and transcriptomic data, making it easier for researchers to interpret and communicate their findings.
To get started, simply contact us through our website or email. We will discuss your project requirements and provide a customized solution tailored to your research needs.
We use publicly available databases (e.g., NCBI, GEO, TCGA) to annotate genomic regions and conduct functional analysis of genes and regulatory elements. This analysis helps researchers understand the biological roles of specific genes and their potential impact on diseases or treatments.
Our bioinformatics services are valuable for academic researchers, pharmaceutical companies, biotechnology firms, and clinical labs. Whether you’re conducting basic research or developing new treatments, our data analysis and visualization services can help support your scientific goals.
You will receive raw results in Excel or CSV format, along with a comprehensive report detailing the methods used for each analysis. We also provide customized data visualizations and presentation-ready formats for sharing your findings.
Yes, we provide validation services by cross-referencing your findings with publicly available datasets from sources like NCBI, GEO, and TCGA. This ensures that your research results are reliable and supported by existing data.
